Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921224.1_cds_XP_016470235.1_62708
CDS Infomation

[gene=LOC107792526] [db_xref=GeneID:107792526] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1] [protein_id=XP_016470235.1] [location=complement(join(28805..29724,29796..30056,30152..30184,36093..36867))] [gbkey=CDS]
Sequence

ATGTGTCCAAGTCAATTATTCTCCTTCTTCTTCGTCTTTCTCCTTCTTCCTTTGTTCATC
AACTCCAGTGAAGCTAATACTAATACATCCTTTGCATATTGTCCTCCATTTATCTGCCAT
GGTCGTAATATTTCGTATCCTTTTTGGAGCCTTGACAGTTTCAACTCCACATCTCCACGG
TACTGTGGTTATCCAGGATTTGGGATCCACTGCTCTCAAAACAATCCAATTCTTAACATT
TCAAATGATTCTTTCTTCGTTAAAGACATAAATTACAGCACCTACTCCCTTACCCTGGTG
GATATTGATGCTTTTGGTAGCACAGCTTGCCCCAGGGTACATCATAACCTCACTCTGGGA
GATTTGCCATTAAAATATTCAGAGCTTGATCTAAACCTTACCTTCTATTTTAACTGTATC
AATTCGCTTTCATCCGGTCGTCCGTTAGATTGCTTAAATTCGGGTCGAAACAAGTCATAT
TTATATGTTGAGGATAATGAGCCTGATCATTTGAATTGGTACGGAATTTGTGACAAGAAA
GTGGTGGCGACGGTGATGGACAGTGGGAGGAATCGAGAACTCGGTGTGGCTGTGGGTGAG
GAGTTCACTAGAGGACTTGGCGCGGCAATGGACGAGGGGTTCGTGCTGGACTGGCGGATC
GCAACGGAGTGCGGCAAGTGTGAGGCATCAGACGGGCGTTGTGGTTACGACAATTCAACC
AACGAGTCCTTGTGCTATTGCAAAGATGGCACCGTAAAGTTTGATCACTGCAAAGGAAGA
AACAAAATCGGATTGAAGGTTGGCATAGGAGTTGGTGCAGCTGCGTCTACCGCTTTGATG
GCAGGTGTAATTTTCTTTATCTATCGTTGTAGACAGAAGAAAATTTATGCTGGTTCATCG
TTGTTCTCCACAAGCATTCTTTCGTATCCCTCCTCAATAAAAGACCCCGAAAAGGCTACT
ACCTTAATCGGAGTTCACCTCTTTGATTACAATGAACTAGATGAAGCCACTAACAATTTT
GATTCCAAGAAAGAGCTTGGAGATGGTGGATATGGCACAGTATACAAAGGTAAACTTCGA
GATGGGCGTGTAGTTGCTGTAAAACGTTTATATGAAAACAACTGCAAGAGGGTTGAGCAA
TTCATGAACGAAATTGATATCTTAACACGGTTGCATCATCCAAACCTAGTCACCCTTTAC
GGATGCACATCTCGCCATTCCAGGGAGCTTCTACTTGTTTACGAATACATTCCCAATGGA
ACAGTTTCTGATCATTTACATGGTGTACATTCAAAGCCTGGATCGCTTTCATGGAATACA
CGAATGAAGATTTCCATAGAAACAGCAAGTGCATTAGCCTATCTCCATGCTTCAGATGTC
ATTCACCGAGATGTAAAAACTAACAATATCCTCTTAGACAACAATTTCTGTGTTAAAGTA
GCAGATTTTGGCTTGTCTCGGCTTTTCCCAACGGATGTTACTCACGTCTCAACAGCTCCA
CAGGGTACTCCTGGATATGTTGATCCCGAGTACCACGAGTGCTATCAGCTCACTGACAAA
AGTGATGTTTATAGTTTCGGAGTGGTTCTAATTGAGCTTATATCATCACTGCCTGCTGTT
GATATCTGTAGGCACCGGCATGAAATAAATTTGTCGAATATGGCCATTAACAAGATTCAA
GGCAATGCATTACATGAGTTGGTGGATTCAAATCTTGGGTTTGACACTGATGACAAAGTA
AGGTCGATGATTACTGCAGTGGCGGAGTTGGCATTTCAGTGTCTACAGAGTGATAGGGAA
TTGAGACCATCTATGCAGGAAGTCGTGGAGGCGCTGATGAGAATTCAGAGAATTAATAAA
ACAACAGGGAAAACAGATAAGGAATGTCCTGATGATGATACAGGGTTGTTGAATAGTATC
ACGTTATTAGTATCACCTGATTCGGTTACTACAAAATGGAGCAGCAGTCCAACGACACCC
AACTCCTAG

Peptide Sequence

PEP ID

XP_016470235.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 [Nicotiana tabacum]
Sequence

MCPSQLFSFFFVFLLLPLFINSSEANTNTSFAYCPPFICHGRNISYPFWSLDSFNSTSPR
YCGYPGFGIHCSQNNPILNISNDSFFVKDINYSTYSLTLVDIDAFGSTACPRVHHNLTLG
DLPLKYSELDLNLTFYFNCINSLSSGRPLDCLNSGRNKSYLYVEDNEPDHLNWYGICDKK
VVATVMDSGRNRELGVAVGEEFTRGLGAAMDEGFVLDWRIATECGKCEASDGRCGYDNST
NESLCYCKDGTVKFDHCKGRNKIGLKVGIGVGAAASTALMAGVIFFIYRCRQKKIYAGSS
LFSTSILSYPSSIKDPEKATTLIGVHLFDYNELDEATNNFDSKKELGDGGYGTVYKGKLR
DGRVVAVKRLYENNCKRVEQFMNEIDILTRLHHPNLVTLYGCTSRHSRELLLVYEYIPNG
TVSDHLHGVHSKPGSLSWNTRMKISIETASALAYLHASDVIHRDVKTNNILLDNNFCVKV
ADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHECYQLTDKSDVYSFGVVLIELISSLPAV
DICRHRHEINLSNMAINKIQGNALHELVDSNLGFDTDDKVRSMITAVAELAFQCLQSDRE
LRPSMQEVVEALMRIQRINKTTGKTDKECPDDDTGLLNSITLLVSPDSVTTKWSSSPTTP
NS

Transcript Sequence

Gene sequence data has not been registered.